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Compile LAGOSNE data

Source: R/compile.R
lagosne_compile.Rd

Compile LAGOSNE data from component flat files. This function should rarely be called directly outside of manual updating of source data.

Usage

lagosne_compile(
  version,
  limno_folder = NA,
  geo_folder = NA,
  locus_folder = NA,
  dest_folder = NA
)

Arguments

version

character LAGOSNE database version string

limno_folder

file.path to limno export folder

geo_folder

file.path to geo export folder

locus_folder

file.path to locus export folder

dest_folder

file.path optional will default to the location returned by user_data_dir

Examples

if (FALSE) {
lagosne_compile("1.087.3",
 limno_folder = "~/Downloads/LAGOS-NE-LIMNO-EXPORT",
 geo_folder   = "~/Downloads/LAGOS-NE-GEO-EXPORT",
 locus_folder = "~/Downloads/LAGOS-NE-LOCUS-EXPORT",
 dest_folder = lagos_path())
}