Retrieve LAGOSUS flat files

Source: R/get.R

Retrieve LAGOSUS flat files from EDI.

lagosus_get(
  locus_version = NA,
  locus_folder = NA,
  locus_overwrite = FALSE,
  limno_version = NA,
  limno_folder = NA,
  limno_overwrite = FALSE,
  geo_version = NA,
  geo_folder = NA,
  geo_overwrite = FALSE,
  depth_version = NA,
  depth_folder = NA,
  depth_overwrite = FALSE,
  dest_folder = NA
)

Arguments

locus_version

character LAGOSUS database version string
locus_folder

file.path to locus export folder
locus_overwrite

logical overwrite existing data?
limno_version

character LAGOSUS database version string
limno_folder

file.path to limno export folder
limno_overwrite

logical overwrite existing data?
geo_version

character LAGOSUS database version string
geo_folder

file.path to geo export folder
geo_overwrite

logical overwrite existing data?
depth_version

character LAGOSUS database version string
depth_folder

file.path to depth export folder
depth_overwrite

logical overwrite existing data?
dest_folder

file.path recommended to set as the path returned by lagosus_path

Examples

if (FALSE) {
# default to latest version
lagosus_get(dest_folder = LAGOSUS::lagosus_path())

# get previous version(s)
# - recommended to install corresponding package version
# - See 'Legacy Versions' section of the README for instructions
}